*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat AB-T. turgidum, Messapia x dicoccoides
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Tturgidum-MxM-5A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - T. turgidum, Messapia x dicoccoides [ View Map Set Info ]
Map Name: Tturgidum-MxM-5A
Map Start: -24.6
Map Stop: 143.7
Features by Type:
17 locus
17 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 17 of 17.
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-5A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xpsr911-5A locus 55.9 Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5A Xpsr911-5A locus 134.6 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xpsr911-5A locus 49.1 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-5A Xpsr911-5A locus 103 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5A Xpsr911-5A locus 84.1 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, Group 5 - Ta-Physical-Sarma-5A Xpsr911-5A locus 0.66 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-5A Xpsr911-5A locus 35 () Automated name-based View Maps
Centromere-5A locus 0 Wheat ABD - 5A, DS 5AIran - 5A, DS 5AIran Centromere-5A locus 35.2 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-5A Centromere-5A locus 47.8 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Centromere-5A locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5A Centromere-5A locus 33.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5A Centromere-5A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-5A Centromere-5A locus 46 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-5A Centromere-5A locus 60.8 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-5A Centromere-5A locus 91 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-5A Centromere-5A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5A Centromere-5A locus 20 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5A Centromere-5A locus 120.4 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-5A Centromere-5A locus 36.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Centromere-5A locus 25.3 - 29.1 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-5A Centromere-5A locus 13.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-5A Centromere-5A locus 15 () Automated name-based View Maps
Xcdo412-5A locus 30.3 Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xcdo412-5A locus 22 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xcdo412-5A locus 39.8 () Automated name-based View Maps
Wheat ABD - 5AL, CS q deletions, physical - 5AL, q deletions Xcdo412-5A locus 83.5 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5A Xcdo412-5A locus 109 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xcdo412-5A locus 62.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xcdo412-5A locus 50.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5A Xcdo412-5A locus 27.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5A Xcdo412-5A locus 20.7 () Automated name-based View Maps
Xpsr145-5A locus 130.7 Wheat ABD - Wheat, Physical, Group 5 - Ta-Physical-Sarma-5A Xpsr145-5A locus 0.73 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xpsr145-5A locus 109.9 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-5A Xpsr145-5A locus 78.9 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5A Xpsr145-5A locus 189.4 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-5A Xpsr145-5A locus 193 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5A Xpsr145-5A locus 135 () Automated name-based View Maps
Xpsr164-5A locus 143.7 Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xpsr164-5A locus 123.3 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5A Xpsr164-5A locus 204 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-5A Xpsr164-5A locus 104.3 () Automated name-based View Maps
Xcdo504-5A locus 118.3 Wheat ABD - Wheat, Physical, Group 5 - Ta-Physical-Sarma-5A Xcdo504-5A locus 0.73 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-5A Xcdo504-5A locus 154.6 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5A Xcdo504-5A locus 177 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xcdo504-5A locus 97.4 () Automated name-based View Maps
Wheat ABD - 5A, DS 5AIran - 5A, DS 5AIran Xcdo504-5A locus 121.8 () Automated name-based View Maps
Wheat ABD - 5A, DS 5AEurope - 5A, DS 5AEurope Xcdo504-5A locus 93 () Automated name-based View Maps
Xbcd1088-5A locus 33.1 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xbcd1088-5A locus 66.5 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5A Xbcd1088-5A locus 111.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xbcd1088-5A locus 43.9 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xbcd1088-5A locus 25.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5A Xbcd1088-5A locus 37 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xbcd1088-5A locus 70.2 () Automated name-based View Maps
Xpsr912-5A locus 36.7 Wheat ABD - Wheat, Gale - Ta-Gale-5A Xpsr912-5A locus 17.7 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-5A Xpsr912-5A locus 82 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5A Xpsr912-5A locus 115.4 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xpsr912-5A locus 28.5 () Automated name-based View Maps
Xpsr370-5A locus 141.5 Wheat ABD - Wheat, Gale - Ta-Gale-5A Xpsr370-5A locus 94.7 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xpsr370-5A locus 120.8 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5A Xpsr370-5A locus 202 () Automated name-based View Maps
Xmgb341-5A locus -24.6 Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xmgb341-5A locus -31.8 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5A Xmgb341-5A locus 49.7 () Automated name-based View Maps
Xubp3-5A locus -22.8 Wheat ABD - Wheat, Gale - Ta-Gale-5A Xubp3-5A locus -15.5 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xubp3-5A locus -30 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5A Xubp3-5A locus 51.5 () Automated name-based View Maps
Xmgb191-5A locus -8.9 Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5A Xmgb191-5A locus 65.4 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xmgb191-5A locus -14.1 () Automated name-based View Maps
XksuG44-5A locus -1.3 Wheat ABD - Wheat, Gale - Ta-Gale-5A XksuG44-5A locus -1.5 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A XksuG44-5A locus -6.2 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5A XksuG44-5A locus 90.1 () Automated name-based View Maps
Aadh-A1 locus 5.6 Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Aadh-A1 locus 1 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5A Aadh-A1 locus 97 () Automated name-based View Maps
XksuH1-5A locus 34.8 Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A XksuH1-5A locus 26.8 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5A XksuH1-5A locus 113.5 () Automated name-based View Maps
Xmgb63-5A locus 46.7 Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xmgb63-5A locus 40.2 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5A Xmgb63-5A locus 125.4 () Automated name-based View Maps
Xpsr120-5A locus 93.9 Wheat ABD - 5A, DS 5AIran - 5A, DS 5AIran Xpsr120-5A locus 95.8 () Automated name-based View Maps
Wheat ABD - 5A, DS 5AEurope - 5A, DS 5AEurope Xpsr120-5A locus 71.9 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, Group 5 - Ta-Physical-Sarma-5A Xpsr120-5A locus 0.6 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5A Xpsr120-5A locus 87.4 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-5A Xpsr120-5A locus 118 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xpsr120-5A locus 61 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5A Xpsr120-5A locus 147 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.